Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 5x79
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
10gsRCSB PDB    PDBbind209aa, >10GS_1|Chains... at 100%
11gsRCSB PDB    PDBbind210aa, >11GS_1|Chains... *
13gsRCSB PDB    PDBbind210aa, >13GS_1|Chains... at 100%
1lbkRCSB PDB    PDBbind208aa, >1LBK_1|Chains... at 97%
2gssRCSB PDB    PDBbind209aa, >2GSS_1|Chains... at 100%
2j9hRCSB PDB    PDBbind209aa, >2J9H_1|Chains... at 98%
3dgqRCSB PDB    PDBbind210aa, >3DGQ_1|Chains... at 100%
3gssRCSB PDB    PDBbind209aa, >3GSS_1|Chains... at 100%
3gusRCSB PDB    PDBbind209aa, >3GUS_1|Chains... at 100%
3hjoRCSB PDB    PDBbind209aa, >3HJO_1|Chains... at 99%
3ie3RCSB PDB    PDBbind209aa, >3IE3_1|Chains... at 99%
5j41RCSB PDB    PDBbind209aa, >5J41_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5x79
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGlutathione S-transferase Pi
Ligand NameGF5
EC.Number E.C.-.-.-.-
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)IC50=12uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Chem. Commun. (Camb.) Vol. 53: pp. 11138-11141
Ligand Properties
Formula C12H26N3O8S2
Molecular Weight 404.480
Exact Mass 404.116
No. of atoms 51
No. of bonds 50
Polar Surface Area 265
LOGP Value -4.06      (Computed with XLOGP3)
-3.19      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 19
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P09211  
Entrez Gene IDNCBI Entrez Gene ID: 2950  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2022    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com