Browse entries in the PDBbind-CN Database

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Related entries of code: 6flg
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4utnRCSB PDB    PDBbind275aa, >4UTN_1|Chains... at 100%
4utrRCSB PDB    PDBbind275aa, >4UTR_1|Chains... at 100%
4utvRCSB PDB    PDBbind275aa, >4UTV_1|Chains... at 100%
4utxRCSB PDB    PDBbind275aa, >4UTX_1|Chains... at 100%
4uu7RCSB PDB    PDBbind275aa, >4UU7_1|Chains... at 100%
4uu8RCSB PDB    PDBbind275aa, >4UU8_1|Chains... at 100%
4uuaRCSB PDB    PDBbind275aa, >4UUA_1|Chains... at 100%
4uubRCSB PDB    PDBbind275aa, >4UUB_1|Chains... at 100%
6enxRCSB PDB    PDBbind271aa, >6ENX_1|Chain... at 100%
6eo0RCSB PDB    PDBbind277aa, >6EO0_1|Chains... at 100%
6fkyRCSB PDB    PDBbind284aa, >6FKY_1|Chains... *
6fkzRCSB PDB    PDBbind284aa, >6FKZ_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6fkyRCSB PDB    PDBbind8mer
6fkzRCSB PDB    PDBbind8mer

Entry Information
PDB ID6flg
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameSirtuin 5
Ligand Name8mer
EC.Number E.C.-.-.-.-
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Ki=30.1nM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) J. Med. Chem. Vol. 61: pp. 2460-2471
Ligand Properties
Formula C61H79N9O16S
Molecular Weight 1226.400
Exact Mass 1225.540
No. of atoms 166
No. of bonds 169
Polar Surface Area 419.33
LOGP Value 8.84      (Computed with XLOGP3)
6.29      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 10
No. of Hydrogen Bond Acceptors: 16
No. of Rotatable Bonds: 43
No. of Nitrogen and Oxygen Atoms: 25
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q6DHI5  
Entrez Gene IDNCBI Entrez Gene ID: 436878  
ASDInformation of known allosteric effects of PDB entries

 
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