Browse entries in the PDBbind-CN Database

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Related entries of code: 6g15
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6g0zRCSB PDB    PDBbind301aa, >6G0Z_1|Chains... *
6g14RCSB PDB    PDBbind294aa, >6G14_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6ex0RCSB PDB    PDBbindC1Z

Entry Information
PDB ID6g15
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameRibosome biogenesis GTPase A
Ligand NameC1Z
EC.Number E.C.-.-.-.-
Resolution 1.65(Å)
Affinity (Kd/Ki/IC50)Kd=4.31uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) J. Biol. Chem. Vol. 293: pp. 19699-19709
Ligand Properties
Formula C10H26N5O20P5
Molecular Weight 691.204
Exact Mass 690.986
No. of atoms 66
No. of bonds 68
Polar Surface Area 476.39
LOGP Value -8.84      (Computed with XLOGP3)
-3.89      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 15
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 25
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A0H2XK72  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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