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Related entries of code: 6ow7
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2ai7RCSB PDB    PDBbind203aa, >2AI7_1|Chain... *
2aiaRCSB PDB    PDBbind203aa, >2AIA_1|Chain... at 100%
2aieRCSB PDB    PDBbind203aa, >2AIE_1|Chain... at 99%
3strRCSB PDB    PDBbind203aa, >3STR_1|Chain... at 98%
3svjRCSB PDB    PDBbind203aa, >3SVJ_1|Chain... at 98%
3sw8RCSB PDB    PDBbind203aa, >3SW8_1|Chain... at 98%
4eoxRCSB PDB    PDBbind203aa, >4EOX_1|Chain... at 98%
6ow2RCSB PDB    PDBbind202aa, >6OW2_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6ow7
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePeptide deformylase
Ligand NameN9Y
EC.Number E.C.3.5.1.88
Resolution 1.45(Å)
Affinity (Kd/Ki/IC50)IC50=1nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Bioorg.Med.Chem.Lett. Vol. 29: pp. 2410-2414
Ligand Properties
Formula C20H30N5O4
Molecular Weight 404.483
Exact Mass 404.230
No. of atoms 59
No. of bonds 61
Polar Surface Area 119.45
LOGP Value 1.72      (Computed with XLOGP3)
2.75      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8DP79  
Entrez Gene IDNCBI Entrez Gene ID: 60233589  61429639  
ASDInformation of known allosteric effects of PDB entries

 
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