Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 6ps5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6ps6RCSB PDB    PDBbind506aa, >6PS6_1|Chain... at 100%
6ps4RCSB PDB    PDBbind506aa, >6PS4_1|Chain... at 100%
6ps3RCSB PDB    PDBbind506aa, >6PS3_1|Chain... at 100%
6ps1RCSB PDB    PDBbind506aa, >6PS1_1|Chain... at 100%
6ps0RCSB PDB    PDBbind506aa, >6PS0_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1dy4RCSB PDB    PDBbindSNP

Entry Information
PDB ID6ps5
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameFusion protein of Beta-2 adrenergic receptor and T4 Lysozyme
Ligand NameSNP
EC.Number E.C.3.2.1.17
Resolution 2.9(Å)
Affinity (Kd/Ki/IC50)Ki=3.69nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Iucrj Vol. 6: pp. 1106-1119
Ligand Properties
Formula C16H22NO2
Molecular Weight 260.351
Exact Mass 260.165
No. of atoms 41
No. of bonds 42
Polar Surface Area 46.07
LOGP Value 2.90      (Computed with XLOGP3)
1.55      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P07550  D9IEF7  
Entrez Gene IDNCBI Entrez Gene ID: 154  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2022    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com