Browse entries in the PDBbind-CN Database

Display Options: Structure:  

Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 3c10
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3c0zRCSB PDB    PDBbind423aa, >3C0Z_1|Chains... *
3znrRCSB PDB    PDBbind423aa, >3ZNR_1|Chains... at 100%
3znsRCSB PDB    PDBbind423aa, >3ZNS_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1c3rRCSB PDB    PDBbindTSN
3f0rRCSB PDB    PDBbindTSN
5eduRCSB PDB    PDBbindTSN
5eefRCSB PDB    PDBbindTSN
5eekRCSB PDB    PDBbindTSN
6hoyRCSB PDB    PDBbindTSN

Entry Information
PDB ID3c10
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHistone deacetylase 7a
Ligand NameTSN
EC.Number E.C.-.-.-.-
Resolution 2(Å)
Affinity (Kd/Ki/IC50)IC50=0.3uM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) J.Biol.Chem. Vol. 283: pp. 11355-11363
Ligand Properties
Formula C17H22N2O3
Molecular Weight 302.368
Exact Mass 302.163
No. of atoms 44
No. of bonds 44
Polar Surface Area 69.64
LOGP Value 2.75      (Computed with XLOGP3)
2.97      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8WUI4  
Entrez Gene IDNCBI Entrez Gene ID: 51564  
ASDInformation of known allosteric effects of PDB entries

This site has been visited times since Nov 2007.

Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓

Technical Support锛堟妧鏈敮鎸侊級: