Browse entries in the PDBbind-CN Database

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Related entries of code: 5hbs
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5ha1RCSB PDB    PDBbind140aa, >5HA1_1|Chain... *
6e6mRCSB PDB    PDBbind140aa, >6E6M_1|Chains... at 100%
6e5tRCSB PDB    PDBbind140aa, >6E5T_1|Chain... at 100%
6e5lRCSB PDB    PDBbind140aa, >6E5L_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1fbmRCSB PDB    PDBbindRTL
1gx8RCSB PDB    PDBbindRTL
1rbpRCSB PDB    PDBbindRTL
6py0RCSB PDB    PDBbindRTL

Entry Information
PDB ID5hbs
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namehuman cellular retinol binding protein 1, CRBP1
Ligand NameRTL
EC.Number E.C.-.-.-.-
Resolution 0.89(Å)
Affinity (Kd/Ki/IC50)Kd=18.5nM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) J.Biol.Chem. Vol. 291: pp. 8528-8540
Ligand Properties
Formula C20H30O
Molecular Weight 286.452
Exact Mass 286.230
No. of atoms 51
No. of bonds 51
Polar Surface Area 20.23
LOGP Value 5.74      (Computed with XLOGP3)
5.51      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 1
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P09455  
Entrez Gene IDNCBI Entrez Gene ID: 5947  
ASDInformation of known allosteric effects of PDB entries

 
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