Browse entries in the PDBbind-CN Database

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Related entries of code: 5mfs
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2zxgRCSB PDB    PDBbind870aa, >2ZXG_1|Chain... at 100%
3kedRCSB PDB    PDBbind891aa, >3KED_1|Chain... *
4q4eRCSB PDB    PDBbind891aa, >4Q4E_1|Chain... at 100%
4q4iRCSB PDB    PDBbind891aa, >4Q4I_1|Chain... at 100%
5mfrRCSB PDB    PDBbind891aa, >5MFR_1|Chain... at 100%
5mftRCSB PDB    PDBbind891aa, >5MFT_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5mfs
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameAminopeptidase N
Ligand Name7ML
EC.Number E.C.3.4.11.2
Resolution 1.57(Å)
Affinity (Kd/Ki/IC50)Ki=330nM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Proteins Vol. 85: pp. 1413-1421
Ligand Properties
Formula C17H20NO2
Molecular Weight 270.346
Exact Mass 270.149
No. of atoms 40
No. of bonds 42
Polar Surface Area 68.1
LOGP Value 1.94      (Computed with XLOGP3)
1.13      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P04825  
Entrez Gene IDNCBI Entrez Gene ID: 947253  
ASDInformation of known allosteric effects of PDB entries

 
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