Browse entries in the PDBbind-CN Database

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Related entries of code: 5nn6
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5nn4RCSB PDB    PDBbind872aa, >5NN4_1|Chain... *
5nn5RCSB PDB    PDBbind872aa, >5NN5_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3l4wRCSB PDB    PDBbindMIG

Entry Information
PDB ID5nn6
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameLysosomal alpha-glucosidase
Ligand NameMIG
EC.Number E.C.-.-.-.-
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=3.0uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Nat Commun Vol. 8: pp. 1111-1111
Ligand Properties
Formula C8H18NO5
Molecular Weight 208.232
Exact Mass 208.118
No. of atoms 32
No. of bonds 32
Polar Surface Area 105.59
LOGP Value -2.57      (Computed with XLOGP3)
-3.11      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P10253  
Entrez Gene IDNCBI Entrez Gene ID: 2548  
ASDInformation of known allosteric effects of PDB entries

 
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