Browse entries in the PDBbind-CN Database

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Related entries of code: 5ntw
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5nu1RCSB PDB    PDBbind20aa, >5NU1_2|Chains... at 100%
6fzuRCSB PDB    PDBbind20aa, >6FZU_2|Chains... at 100%
6g07RCSB PDB    PDBbind20aa, >6G07_2|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5ntw
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameNuclear receptor ROR-gamma
Ligand Name98N
EC.Number E.C.-.-.-.-
Resolution 1.64(Å)
Affinity (Kd/Ki/IC50)IC50=0.6nM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) ChemMedChem Vol. 12: pp. 1014-1021
Ligand Properties
Formula C27H36F3N4O3S
Molecular Weight 553.660
Exact Mass 553.246
No. of atoms 74
No. of bonds 77
Polar Surface Area 101.84
LOGP Value 3.83      (Computed with XLOGP3)
6.71      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P48552  P51449  
Entrez Gene IDNCBI Entrez Gene ID: 8204  6097  
ASDInformation of known allosteric effects of PDB entries

 
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