Browse entries in the PDBbind-CN Database

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Related entries of code: 5nu1
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5ntwRCSB PDB    PDBbind20aa, >5NTW_2|Chains... *
6fzuRCSB PDB    PDBbind20aa, >6FZU_2|Chains... at 100%
6g07RCSB PDB    PDBbind20aa, >6G07_2|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5ni5RCSB PDB    PDBbind8YB

Entry Information
PDB ID5nu1
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameNuclear receptor ROR-gamma
Ligand Name8YB
EC.Number E.C.-.-.-.-
Resolution 1.85(Å)
Affinity (Kd/Ki/IC50)IC50=1nM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) ChemMedChem Vol. 12: pp. 1014-1021
Ligand Properties
Formula C26H20Cl2N2O4S2
Molecular Weight 559.484
Exact Mass 558.024
No. of atoms 56
No. of bonds 59
Polar Surface Area 129.82
LOGP Value 6.26      (Computed with XLOGP3)
7.48      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P48552  P51449  
Entrez Gene IDNCBI Entrez Gene ID: 8204  6097  
ASDInformation of known allosteric effects of PDB entries

 
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