Browse entries in the PDBbind-CN Database

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Related entries of code: 4zt8
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4emfRCSB PDB    PDBbind246aa, >4EMF_1|Chain... *
4emrRCSB PDB    PDBbind246aa, >4EMR_1|Chain... at 100%
4i47RCSB PDB    PDBbind246aa, >4I47_1|Chain... at 100%
5csoRCSB PDB    PDBbind246aa, >5CSO_1|Chain... at 100%
5cstRCSB PDB    PDBbind246aa, >5CST_1|Chain... at 100%
5y48RCSB PDB    PDBbind246aa, >5Y48_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5ko5RCSB PDB    PDBbindCYT

Entry Information
PDB ID4zt8
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameRibosome inactivating protein
Ligand NameCYT
EC.Number E.C.3.2.2.22
Resolution 1.98(Å)
Affinity (Kd/Ki/IC50)Kd=41uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Biochem Biophys Rep Vol. 4: pp. 134-140
Ligand Properties
Formula C4H6N3O
Molecular Weight 112.110
Exact Mass 112.051
No. of atoms 14
No. of bonds 14
Polar Surface Area 69.42
LOGP Value -0.21      (Computed with XLOGP3)
-0.28      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): D9J2T9  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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