Browse entries in the PDBbind-CN Database

Display Options: Structure:  

Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 5e8w
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1py5RCSB PDB    PDBbind326aa, >1PY5_1|Chain... at 100%
1rw8RCSB PDB    PDBbind301aa, >1RW8_1|Chain... at 100%
1vjyRCSB PDB    PDBbind303aa, >1VJY_1|Chain... at 100%
2wotRCSB PDB    PDBbind306aa, >2WOT_1|Chain... at 99%
2wouRCSB PDB    PDBbind306aa, >2WOU_1|Chain... at 99%
2x7oRCSB PDB    PDBbind342aa, >2X7O_1|Chains... at 100%
3faaRCSB PDB    PDBbind342aa, >3FAA_1|Chains... at 100%
3gxlRCSB PDB    PDBbind303aa, >3GXL_1|Chain... at 100%
3hmmRCSB PDB    PDBbind303aa, >3HMM_1|Chain... at 100%
3kcfRCSB PDB    PDBbind342aa, >3KCF_1|Chains... at 100%
3tzmRCSB PDB    PDBbind309aa, >3TZM_1|Chain... at 98%
5e8zRCSB PDB    PDBbind307aa, >5E8Z_1|Chain... at 98%
5e90RCSB PDB    PDBbind307aa, >5E90_1|Chain... at 96%
5qikRCSB PDB    PDBbind307aa, >5QIK_1|Chain... at 98%
5qilRCSB PDB    PDBbind307aa, >5QIL_1|Chain... at 98%
5qimRCSB PDB    PDBbind306aa, >5QIM_1|Chain... at 99%
5usqRCSB PDB    PDBbind299aa, >5USQ_1|Chain... at 100%
6b8yRCSB PDB    PDBbind307aa, >6B8Y_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1aq1RCSB PDB    PDBbindSTU
1nvrRCSB PDB    PDBbindSTU
1okyRCSB PDB    PDBbindSTU
1q3dRCSB PDB    PDBbindSTU
1sm2RCSB PDB    PDBbindSTU
1stcRCSB PDB    PDBbindSTU
1u59RCSB PDB    PDBbindSTU
1xbcRCSB PDB    PDBbindSTU
1xjdRCSB PDB    PDBbindSTU
1yhsRCSB PDB    PDBbindSTU
2dq7RCSB PDB    PDBbindSTU
2gcdRCSB PDB    PDBbindSTU
2oicRCSB PDB    PDBbindSTU
2z7rRCSB PDB    PDBbindSTU
3a4oRCSB PDB    PDBbindSTU
3hmoRCSB PDB    PDBbindSTU
4erwRCSB PDB    PDBbindSTU
4qmyRCSB PDB    PDBbindSTU
4yzcRCSB PDB    PDBbindSTU
5kq5RCSB PDB    PDBbindSTU
5lohRCSB PDB    PDBbindSTU

Entry Information
PDB ID5e8w
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameTGF-beta receptor type-1 kinase domain (T204D mutant)
Ligand NameSTU
EC.Number E.C.
Resolution 1.86(Å)
Affinity (Kd/Ki/IC50)IC50=41uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Acta Crystallogr.,Sect.D Vol. 72: pp. 658-674
Ligand Properties
Formula C28H27N4O3
Molecular Weight 467.539
Exact Mass 467.208
No. of atoms 62
No. of bonds 69
Polar Surface Area 74.03
LOGP Value 3.24      (Computed with XLOGP3)
3.66      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 8
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P36897  
Entrez Gene IDNCBI Entrez Gene ID: 7046  
ASDInformation of known allosteric effects of PDB entries

This site has been visited times since Nov 2007.

Copyright ©2007-2022    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓

Technical Support锛堟妧鏈敮鎸侊級: