Browse entries in the PDBbind-CN Database

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Related entries of code: 5e90
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1py5RCSB PDB    PDBbind326aa, >1PY5_1|Chain... at 100%
1rw8RCSB PDB    PDBbind301aa, >1RW8_1|Chain... at 100%
1vjyRCSB PDB    PDBbind303aa, >1VJY_1|Chain... at 100%
2wotRCSB PDB    PDBbind306aa, >2WOT_1|Chain... at 99%
2wouRCSB PDB    PDBbind306aa, >2WOU_1|Chain... at 99%
2x7oRCSB PDB    PDBbind342aa, >2X7O_1|Chains... at 100%
3faaRCSB PDB    PDBbind342aa, >3FAA_1|Chains... at 100%
3gxlRCSB PDB    PDBbind303aa, >3GXL_1|Chain... at 100%
3hmmRCSB PDB    PDBbind303aa, >3HMM_1|Chain... at 100%
3kcfRCSB PDB    PDBbind342aa, >3KCF_1|Chains... at 100%
3tzmRCSB PDB    PDBbind309aa, >3TZM_1|Chain... at 98%
5e8wRCSB PDB    PDBbind307aa, >5E8W_1|Chain... at 98%
5e8zRCSB PDB    PDBbind307aa, >5E8Z_1|Chain... at 98%
5qikRCSB PDB    PDBbind307aa, >5QIK_1|Chain... at 98%
5qilRCSB PDB    PDBbind307aa, >5QIL_1|Chain... at 98%
5qimRCSB PDB    PDBbind306aa, >5QIM_1|Chain... at 99%
5usqRCSB PDB    PDBbind299aa, >5USQ_1|Chain... at 100%
6b8yRCSB PDB    PDBbind307aa, >6B8Y_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5e8zRCSB PDB    PDBbind5L4
5e91RCSB PDB    PDBbind5L4

Entry Information
PDB ID5e90
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameTGF-beta R1-8M (T204D,I211V,Y249F, S280T,Y282F,S287N,A350C,L352F)
Ligand Name5L4
EC.Number E.C.2.7.11.30
Resolution 2.05(Å)
Affinity (Kd/Ki/IC50)IC50=0.014uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Acta Crystallogr.,Sect.D Vol. 72: pp. 658-674
Ligand Properties
Formula C22H24N6O3
Molecular Weight 420.464
Exact Mass 420.191
No. of atoms 55
No. of bonds 58
Polar Surface Area 126.49
LOGP Value 1.07      (Computed with XLOGP3)
2.46      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P36897  
Entrez Gene IDNCBI Entrez Gene ID: 7046  
ASDInformation of known allosteric effects of PDB entries

 
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