Browse entries in the PDBbind-CN Database

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Related entries of code: 6oh2
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6oh3RCSB PDB    PDBbind330aa, >6OH3_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1rnmRCSB PDB    PDBbindC5P
3djxRCSB PDB    PDBbindC5P
4g0qRCSB PDB    PDBbindC5P
5dv2RCSB PDB    PDBbindC5P
5km2RCSB PDB    PDBbindC5P
6i1rRCSB PDB    PDBbindC5P

Entry Information
PDB ID6oh2
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCMP-sialic acid transporter
Ligand NameC5P
EC.Number E.C.-.-.-.-
Resolution 2.58(Å)
Affinity (Kd/Ki/IC50)Kd=6.3uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Elife Vol. 8: e45221
Ligand Properties
Formula C9H16N3O8P
Molecular Weight 325.212
Exact Mass 325.068
No. of atoms 37
No. of bonds 38
Polar Surface Area 195.36
LOGP Value -2.93      (Computed with XLOGP3)
-2.88      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q61420  
Entrez Gene IDNCBI Entrez Gene ID: 24060  
ASDInformation of known allosteric effects of PDB entries

 
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