Browse entries in the PDBbind-CN Database

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Related entries of code: 5lgs
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2y1wRCSB PDB    PDBbind348aa, >2Y1W_1|Chains... at 100%
2y1xRCSB PDB    PDBbind348aa, >2Y1X_1|Chains... at 100%
5k8vRCSB PDB    PDBbind361aa, >5K8V_1|Chains... *
5u4xRCSB PDB    PDBbind341aa, >5U4X_1|Chains... at 100%
6arjRCSB PDB    PDBbind349aa, >6ARJ_1|Chains... at 99%
6arvRCSB PDB    PDBbind349aa, >6ARV_1|Chains... at 99%
6izqRCSB PDB    PDBbind333aa, >6IZQ_1|Chains... at 100%
5tbjRCSB PDB    PDBbind361aa, >5TBJ_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1bmbRCSB PDB    PDBbind9-mer
1f90RCSB PDB    PDBbind9-mer
1fzkRCSB PDB    PDBbind9-mer
1fzoRCSB PDB    PDBbind9-mer
1g3fRCSB PDB    PDBbind9-mer
1g7pRCSB PDB    PDBbind9-mer
1guxRCSB PDB    PDBbind9-mer
1gwqRCSB PDB    PDBbind9-mer
1h24RCSB PDB    PDBbind9-mer
1inqRCSB PDB    PDBbind9-mer
1jp5RCSB PDB    PDBbind9-mer
1jufRCSB PDB    PDBbind9-mer
1kl3RCSB PDB    PDBbind9-mer
1kl5RCSB PDB    PDBbind9-mer
1lb6RCSB PDB    PDBbind9-mer
1mfgRCSB PDB    PDBbind9-mer
1mpaRCSB PDB    PDBbind9-mer
1nloRCSB PDB    PDBbind9-mer
1oaiRCSB PDB    PDBbind9-mer
1oxnRCSB PDB    PDBbind9-mer
1oxqRCSB PDB    PDBbind9-mer
1oy7RCSB PDB    PDBbind9-mer
1pcgRCSB PDB    PDBbind9-mer
1prlRCSB PDB    PDBbind9-mer
1prmRCSB PDB    PDBbind9-mer
1rlpRCSB PDB    PDBbind9-mer
1rlqRCSB PDB    PDBbind9-mer
1rstRCSB PDB    PDBbind9-mer
1utcRCSB PDB    PDBbind9-mer
1vwfRCSB PDB    PDBbind9-mer
1vwlRCSB PDB    PDBbind9-mer
1x7qRCSB PDB    PDBbind9-mer
1xr8RCSB PDB    PDBbind9-mer
1xr9RCSB PDB    PDBbind9-mer
1zeaRCSB PDB    PDBbind9-mer
2bgnRCSB PDB    PDBbind9-mer
2bgrRCSB PDB    PDBbind9-mer
2e7lRCSB PDB    PDBbind9-mer
2gv2RCSB PDB    PDBbind9-mer
2h6qRCSB PDB    PDBbind9-mer
2hkfRCSB PDB    PDBbind9-mer
2jo9RCSB PDB    PDBbind9-mer
2jupRCSB PDB    PDBbind9-mer
2kgiRCSB PDB    PDBbind9-mer
2khhRCSB PDB    PDBbind9-mer
2lnwRCSB PDB    PDBbind9-mer
2lsvRCSB PDB    PDBbind9-mer
2mpaRCSB PDB    PDBbind9-mer
2ms4RCSB PDB    PDBbind9-mer
2oeiRCSB PDB    PDBbind9-mer
2oi9RCSB PDB    PDBbind9-mer
2q8yRCSB PDB    PDBbind9-mer
2qt5RCSB PDB    PDBbind9-mer
2rm0RCSB PDB    PDBbind9-mer
2v83RCSB PDB    PDBbind9-mer
2v86RCSB PDB    PDBbind9-mer
2vpeRCSB PDB    PDBbind9-mer
2w0zRCSB PDB    PDBbind9-mer
2x3tRCSB PDB    PDBbind9-mer
2x4oRCSB PDB    PDBbind9-mer
2x4rRCSB PDB    PDBbind9-mer
2x4sRCSB PDB    PDBbind9-mer
2x4tRCSB PDB    PDBbind9-mer
2x4uRCSB PDB    PDBbind9-mer
2xhsRCSB PDB    PDBbind9-mer
2ymtRCSB PDB    PDBbind9-mer
3ah8RCSB PDB    PDBbind9-mer
3bgmRCSB PDB    PDBbind9-mer
3bzeRCSB PDB    PDBbind9-mer
3bzfRCSB PDB    PDBbind9-mer
3bziRCSB PDB    PDBbind9-mer
3ciiRCSB PDB    PDBbind9-mer
3cyyRCSB PDB    PDBbind9-mer
3d1fRCSB PDB    PDBbind9-mer
3d25RCSB PDB    PDBbind9-mer
3drgRCSB PDB    PDBbind9-mer
3eryRCSB PDB    PDBbind9-mer
3fbrRCSB PDB    PDBbind9-mer
3fn0RCSB PDB    PDBbind9-mer
3ft2RCSB PDB    PDBbind9-mer
3ft3RCSB PDB    PDBbind9-mer
3ft4RCSB PDB    PDBbind9-mer
3gl6RCSB PDB    PDBbind9-mer
3ietRCSB PDB    PDBbind9-mer
3k27RCSB PDB    PDBbind9-mer
3lqiRCSB PDB    PDBbind9-mer
3lqjRCSB PDB    PDBbind9-mer
3mxcRCSB PDB    PDBbind9-mer
3mxyRCSB PDB    PDBbind9-mer
3o4lRCSB PDB    PDBbind9-mer
3o6mRCSB PDB    PDBbind9-mer
3obqRCSB PDB    PDBbind9-mer
3obuRCSB PDB    PDBbind9-mer
3obxRCSB PDB    PDBbind9-mer
3qfdRCSB PDB    PDBbind9-mer
3r0hRCSB PDB    PDBbind9-mer
3r42RCSB PDB    PDBbind9-mer
3rwcRCSB PDB    PDBbind9-mer
3rweRCSB PDB    PDBbind9-mer
3rwfRCSB PDB    PDBbind9-mer
3rwgRCSB PDB    PDBbind9-mer
3soqRCSB PDB    PDBbind9-mer
3souRCSB PDB    PDBbind9-mer
3sovRCSB PDB    PDBbind9-mer
3sowRCSB PDB    PDBbind9-mer
3t5iRCSB PDB    PDBbind9-mer
3tf7RCSB PDB    PDBbind9-mer
3tfkRCSB PDB    PDBbind9-mer
3tjhRCSB PDB    PDBbind9-mer
3tpuRCSB PDB    PDBbind9-mer
3zhfRCSB PDB    PDBbind9-mer
4bt9RCSB PDB    PDBbind9-mer
4btbRCSB PDB    PDBbind9-mer
4cdrRCSB PDB    PDBbind9-mer
4ezqRCSB PDB    PDBbind9-mer
4eztRCSB PDB    PDBbind9-mer
4fcmRCSB PDB    PDBbind9-mer
4fmnRCSB PDB    PDBbind9-mer
4i80RCSB PDB    PDBbind9-mer
4ihoRCSB PDB    PDBbind9-mer
4j3uRCSB PDB    PDBbind9-mer
4mexRCSB PDB    PDBbind9-mer
4mnqRCSB PDB    PDBbind9-mer
4mzfRCSB PDB    PDBbind9-mer
4mzhRCSB PDB    PDBbind9-mer
4o2eRCSB PDB    PDBbind9-mer
4od7RCSB PDB    PDBbind9-mer
4pg9RCSB PDB    PDBbind9-mer
4pgbRCSB PDB    PDBbind9-mer
4pgcRCSB PDB    PDBbind9-mer
4pgdRCSB PDB    PDBbind9-mer
4pgeRCSB PDB    PDBbind9-mer
4qbmRCSB PDB    PDBbind9-mer
4rh5RCSB PDB    PDBbind9-mer
4utnRCSB PDB    PDBbind9-mer
4utrRCSB PDB    PDBbind9-mer
4utvRCSB PDB    PDBbind9-mer
4utxRCSB PDB    PDBbind9-mer
4uu7RCSB PDB    PDBbind9-mer
4uu8RCSB PDB    PDBbind9-mer
4uuaRCSB PDB    PDBbind9-mer
4uubRCSB PDB    PDBbind9-mer
4x3hRCSB PDB    PDBbind9-mer
4y5iRCSB PDB    PDBbind9-mer
4yozRCSB PDB    PDBbind9-mer
5aprRCSB PDB    PDBbind9-mer
5brzRCSB PDB    PDBbind9-mer
5bs0RCSB PDB    PDBbind9-mer
5cvdRCSB PDB    PDBbind9-mer
5d0jRCSB PDB    PDBbind9-mer
5dmsRCSB PDB    PDBbind9-mer
5e4wRCSB PDB    PDBbind9-mer
5eelRCSB PDB    PDBbind9-mer
5eokRCSB PDB    PDBbind9-mer
5fjwRCSB PDB    PDBbind9-mer
5gu4RCSB PDB    PDBbind9-mer
5hdaRCSB PDB    PDBbind9-mer
5hebRCSB PDB    PDBbind9-mer
5hedRCSB PDB    PDBbind9-mer
5heyRCSB PDB    PDBbind9-mer
5hf1RCSB PDB    PDBbind9-mer
5hfbRCSB PDB    PDBbind9-mer
5hfcRCSB PDB    PDBbind9-mer
5hffRCSB PDB    PDBbind9-mer
5hjcRCSB PDB    PDBbind9-mer
5hkhRCSB PDB    PDBbind9-mer
5i8cRCSB PDB    PDBbind9-mer
5iszRCSB PDB    PDBbind9-mer
5jhdRCSB PDB    PDBbind9-mer
5lb7RCSB PDB    PDBbind9-mer
5nmeRCSB PDB    PDBbind9-mer
5nmfRCSB PDB    PDBbind9-mer
5nmgRCSB PDB    PDBbind9-mer
5nprRCSB PDB    PDBbind9-mer
5npsRCSB PDB    PDBbind9-mer
5swfRCSB PDB    PDBbind9-mer
5u98RCSB PDB    PDBbind9-mer
5w1vRCSB PDB    PDBbind9-mer
5w1wRCSB PDB    PDBbind9-mer
5w7xRCSB PDB    PDBbind9-mer
5yc3RCSB PDB    PDBbind9-mer
5yc4RCSB PDB    PDBbind9-mer
5ygfRCSB PDB    PDBbind9-mer
5yvxRCSB PDB    PDBbind9-mer
5yy4RCSB PDB    PDBbind9-mer
5ziaRCSB PDB    PDBbind9-mer
6bj2RCSB PDB    PDBbind9-mer
6bj3RCSB PDB    PDBbind9-mer
6c4uRCSB PDB    PDBbind9-mer
6evmRCSB PDB    PDBbind9-mer
6evnRCSB PDB    PDBbind9-mer
6evoRCSB PDB    PDBbind9-mer
6evpRCSB PDB    PDBbind9-mer
6fdpRCSB PDB    PDBbind9-mer
6fdtRCSB PDB    PDBbind9-mer
6qtsRCSB PDB    PDBbind9-mer
6qtqRCSB PDB    PDBbind9-mer
6q38RCSB PDB    PDBbind9-mer
6o9cRCSB PDB    PDBbind9-mer
6o9bRCSB PDB    PDBbind9-mer
6ncpRCSB PDB    PDBbind9-mer
6mt6RCSB PDB    PDBbind9-mer
6mt5RCSB PDB    PDBbind9-mer
6mt4RCSB PDB    PDBbind9-mer
6i7aRCSB PDB    PDBbind9-mer
6i68RCSB PDB    PDBbind9-mer
6i5pRCSB PDB    PDBbind9-mer
6i41RCSB PDB    PDBbind9-mer
6hlbRCSB PDB    PDBbind9-mer
6eqaRCSB PDB    PDBbind9-mer
6d78RCSB PDB    PDBbind9-mer
6aeeRCSB PDB    PDBbind9-mer
5y5wRCSB PDB    PDBbind9-mer
5wlgRCSB PDB    PDBbind9-mer
5u1qRCSB PDB    PDBbind9-mer
5u06RCSB PDB    PDBbind9-mer
5tyiRCSB PDB    PDBbind9-mer
5izaRCSB PDB    PDBbind9-mer
5iz9RCSB PDB    PDBbind9-mer
5iz6RCSB PDB    PDBbind9-mer
6a9cRCSB PDB    PDBbind9-mer
5b6gRCSB PDB    PDBbind9-mer

Entry Information
PDB ID5lgs
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHistone-arginine methyltransferase CARM1
Ligand Name9-mer
EC.Number E.C.-.-.-.-
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)IC50=0.0876uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Proc. Natl. Acad. Sci. U.S.A. Vol. 114: pp. 3625-3630
Ligand Properties
Formula C39H61N11O10
Molecular Weight 843.969
Exact Mass 843.460
No. of atoms 121
No. of bonds 124
Polar Surface Area 328.51
LOGP Value -1.53      (Computed with XLOGP3)
-3.22      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 10
No. of Rotatable Bonds: 26
No. of Nitrogen and Oxygen Atoms: 21
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9WVG6  P11940  
Entrez Gene IDNCBI Entrez Gene ID: 59035  26986  
ASDInformation of known allosteric effects of PDB entries

 
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